Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812500.1_cds_XP_016497197.1_11347
CDS Infomation

[gene=LOC107816033] [db_xref=GeneID:107816033] [protein=translation initiation factor eIF-2B subunit delta-like] [protein_id=XP_016497197.1] [location=complement(join(14262..14324,14449..14503,16476..16572,16657..17401,18360..18712,19970..20104,21020..21419))] [gbkey=CDS]
Sequence

ATGGATCCTCGTCGTCCCTCTCGGGTTATAGATCCAAAAGTTCGTCGGGTGGGTTTTTTC
GCACCCGACCCACACATTAACGACCCGGATAACCATCCCGGGCTTTCCTCATCTCCATCC
GGTAATTCAATGATCCCTCATGCCTTCGAGAGCGTCTCACAGGCTGTTCCTGTTCCTAAT
TCTACGTCTACGTCGCGGCCTCGGCGGTCTTCTTTTGACGAGAGTGAGCAATTGGTAGGA
AGCTACAATCCTATGCAGTCGGTGCTTGGGACTTCGCCGGCGTCTAGTGGAATTGGCGTA
GAGGGAGAGTTTTCCGAGGACTCAACACACTGGAGTCGTCAAACTGACGGCTTCGGTTTG
ACTTCAGCTGCCCGATTGACAGAGTCGAAAGACGATCAAGAACTGATCAGTGCACAAGTT
GCTGAAACTTCAAATGAGGTAGAAAGAAATGCAAAGCCACTGAAAGGGAAGACCACCAAA
GCTGAAAGGCGTGCACTGCAGGAGGCTCAAAGAGCTGCAAAAGCTGCTGGAAAAGGTGGA
GAAACATCTGGGACAAAGTTACATGGACAGTCTGGTAAACCTTCTAAGAAGCCTTCACAA
AAGAAAGATGGTGGCCCCGTGATATCATCTGTAGCTACTTCTCAGACAAAAGGAGGTGAC
CGACCACTAGAGAAAGATCGCAAGAAAGATGTACCTGCTCCTAGGATGCAATTTGATGAT
AATAATCGTGTTGAAAAAGCTAAGAAACGTGCAGTAGTTAAAAAGACTGAAGCTAGAAAT
AGGGCAGAACTGTTTCGGCATTTACCTCAGTATGAACAAGGAACTCAGCTACCTGATCTT
GAATCAAGGTTTTTCCACCTTGACCCTATGCATCCTGCAGTTTACAAGGTAGGACTGCAG
TATTTGGCTGGGGATGTTGTTGGGGGAAATGCTCGCTGTGTTGCAATGCTGCAAGCATTT
CAACAAGCCATCAGAGATTACTCTACACCTCGTGAAAAAGCTCTAGGTAGAGATTTAACA
GCAAGGATCAATGGCTATGTTTCATTTTTTAACGAGTGTAGACCCCTTTCTATTAGCATG
GGAAATGCAATTCGCTTTCTAAAAGCTCGTATAGCCAAGTTATCTTTAACTCTTTCTGAG
TCAGAAGCAAAGGCTGCTCTTTACTCAGATATTGAGCGCTTCATTAATGAGAAGATAGTA
CTAGCTGACAGAGTAATAATAAGACAGGCAGTTACGAAGGTCAGAGATGGTGATGTTCTT
CTCACATTTGGTTCTTCCTCTGTTGTTGAAATGATTCTGCTACACGCTTACGAGCTTGGG
AAGCGATTTCGTGTAATAGTGGTAGATTCTCGCCCTAGACTTGAAGGCAAGGCACTACTT
CGGAGGCTGGTGAAGAAGGGCCTGTGTTGTACATACACTCATATAAATGCTATTTCTTAC
ATTATGCATGAAGTCACTAGAGTGTTCATGGGTGCTGCATCTGTATTATCTAATGGGACT
GTGTACTCTAGAATTGGGACTGCATGTGTTGCTATGGTTGCTCATGCATTCCGTGTTCCT
CTACTGATTTGTTGTGAAGCATATAAGTTTCACGAGAGAGTGCAGCTTGATTCTGTTTGT
TCCAATGAGCTAGGTGAACCAGATGCCATTTCCAAAGTTCCTGGTGGACTGGATGTCAAT
TTTTCGGATAACTGGACAAGCAATGATAATATTCAGCTTCTGAATTTGATGTATGATGTT
ACTCCTTCAGACTATGTCTCAATGATCATCACAGATTATGGCATGATACCAACTACAAGT
GTGCCTGTGATTGTGCGAGAGTATGGGAGAGAACACCTCCTCATATGA

Peptide Sequence

PEP ID

XP_016497197.1
PEP Infomation

PREDICTED: translation initiation factor eIF-2B subunit delta-like [Nicotiana tabacum]
Sequence

MDPRRPSRVIDPKVRRVGFFAPDPHINDPDNHPGLSSSPSGNSMIPHAFESVSQAVPVPN
STSTSRPRRSSFDESEQLVGSYNPMQSVLGTSPASSGIGVEGEFSEDSTHWSRQTDGFGL
TSAARLTESKDDQELISAQVAETSNEVERNAKPLKGKTTKAERRALQEAQRAAKAAGKGG
ETSGTKLHGQSGKPSKKPSQKKDGGPVISSVATSQTKGGDRPLEKDRKKDVPAPRMQFDD
NNRVEKAKKRAVVKKTEARNRAELFRHLPQYEQGTQLPDLESRFFHLDPMHPAVYKVGLQ
YLAGDVVGGNARCVAMLQAFQQAIRDYSTPREKALGRDLTARINGYVSFFNECRPLSISM
GNAIRFLKARIAKLSLTLSESEAKAALYSDIERFINEKIVLADRVIIRQAVTKVRDGDVL
LTFGSSSVVEMILLHAYELGKRFRVIVVDSRPRLEGKALLRRLVKKGLCCTYTHINAISY
IMHEVTRVFMGAASVLSNGTVYSRIGTACVAMVAHAFRVPLLICCEAYKFHERVQLDSVC
SNELGEPDAISKVPGGLDVNFSDNWTSNDNIQLLNLMYDVTPSDYVSMIITDYGMIPTTS
VPVIVREYGREHLLI

Transcript Sequence

Gene sequence data has not been registered.